BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014A08LP1|AL426627
(741 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1453 0.0
>3x_Contig1593
Length = 10902
Score = 1453 bits (733), Expect = 0.0
Identities = 740/741 (99%), Gaps = 1/741 (0%)
Strand = Plus / Minus
Query: 1 ctatctacggtttatgaaggaccaaactgataactattgccctaagttcattgattctta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 8094 ctatctacggtttatgaaggaccaaac-gataactattgccctaagttcattgattctta 8036
Query: 61 tgtttttcagctacctgtcacattctcttttgatagtataccatgcagaattgacagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8035 tgtttttcagctacctgtcacattctcttttgatagtataccatgcagaattgacagaga 7976
Query: 121 atcatgaagaaatgcggacgattatgttgagaaatttcaggggactacaagtgttattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7975 atcatgaagaaatgcggacgattatgttgagaaatttcaggggactacaagtgttattgt 7916
Query: 181 tgctagagaccgttgcatcggtggcgtaccattctgtaataaatatagaacgggacgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7915 tgctagagaccgttgcatcggtggcgtaccattctgtaataaatatagaacgggacgtgt 7856
Query: 241 gtcggtggaaatatggctactggttcacgcaattcattggtgatctgcaatgtgggaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7855 gtcggtggaaatatggctactggttcacgcaattcattggtgatctgcaatgtgggaaag 7796
Query: 301 gtggtcgggcaatgttattgttcttagatttgacatttacgtttctgctcctaacatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7795 gtggtcgggcaatgttattgttcttagatttgacatttacgtttctgctcctaacatcca 7736
Query: 361 tcacttacatgagtactaacgttgaactcaatactgttgatttcaaagttagtgtatctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7735 tcacttacatgagtactaacgttgaactcaatactgttgatttcaaagttagtgtatctg 7676
Query: 421 cactaaacgtggatgaatgggggatactaagcttgctaaagatgaagtccttggatatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7675 cactaaacgtggatgaatgggggatactaagcttgctaaagatgaagtccttggatatgg 7616
Query: 481 acgccagtatcttgaaaatcacgctagacgagttcaacgtcgatcttggtgactcttatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7615 acgccagtatcttgaaaatcacgctagacgagttcaacgtcgatcttggtgactcttatg 7556
Query: 541 ctaactataattccatggaagtaatggattcagattgaataaaaaatatagaggaattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7555 ctaactataattccatggaagtaatggattcagattgaataaaaaatatagaggaattat 7496
Query: 601 ggcggaggtatcattttaacgaactcctgcgttacatcagcaatctctctttgtctttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7495 ggcggaggtatcattttaacgaactcctgcgttacatcagcaatctctctttgtctttgc 7436
Query: 661 attgcagcctcctctttttctaccttttcgtccatatcagaaatataagatgaaatgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7435 attgcagcctcctctttttctaccttttcgtccatatcagaaatataagatgaaatgaaa 7376
Query: 721 attgttaagaaccactcacta 741
|||||||||||||||||||||
Sbjct: 7375 attgttaagaaccactcacta 7355
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5519
Number of Sequences: 1807
Number of extensions: 5519
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 741
length of database: 10,358,551
effective HSP length: 16
effective length of query: 725
effective length of database: 10,329,639
effective search space: 7488988275
effective search space used: 7488988275
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)